Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789937.1_cds_XP_016499223.1_1249
CDS Infomation

[gene=LOC107817844] [db_xref=GeneID:107817844] [protein=CTL-like protein DDB_G0274487] [protein_id=XP_016499223.1] [location=complement(join(17195..17377,17521..17754,19550..20461,20901..21302,21403..21420))] [gbkey=CDS]
Sequence

ATGGGTGCAGTAGAACCTGTAGTTGAAGAAGAAAATGGAGAAAAGGAGACTAAAATACGA
GATGAAGAAGAAGAGAGAGATGTGGAGAAAGGTGAAATGGGTAGTCAACAAAGGGGATTT
CAGACGCAGCCCCCACCTCCACCAGCAACAGGCAGTGATAATTTTAACATGTCGAGAATG
CAAAGATTGAGTGCTACAAATCCTCTTAGGCTTGTAATGAATGCAGGAACTAGAGTTGCT
TCTCCTTCTCCTCCTTATCATCAAGCTCCGCCGCCTGCAGCTCCTCATCAGCACCGTTCT
TTTCCGATTCCTTTTCAGCACCGCCCTTCTCCGGCTCAGGCTCCGCCTCCGCTTCCGTCT
CAGCACCGCCCTTCTCCGGCACCTTCTCAGACTCGCTCCACCCCTGCCACTACCCCTCAC
CAACCTTCAGTAATAACACTGAATTCAAGATCCTACACAAACAAGTTTTCACTTTTTATC
TTCCTACTACACATGGTTGCGGCAATTGGACTAGTTGGTTTTCTTCTATTCAAAGGGGTA
CAAGGCCTACTAGAAGCAGGGGAAGCACAAAGAAAGGAAAGGAGGCTATTAAAGTATTTT
CTACCACAAGTAGAAGCAGCTGCTCTACTTAGCATAACACTAGCATTTATATGGCAAAAG
GCAATGAGAGTGTGGCCTACATTCATGATTCATTTCATACTCTGGGGTTCTTTTATTCTC
ACATTATCAGCTGGAATCCTATTGATTTGCTTCCAAAAACCTGCAACTGATGGTGTTGGA
GTTGTGTTTATTATGTTTGCAATTGGCAATGGATTGTACTCATGTTGGGTGACACCAAGA
ATTAAGTTTTGTACAAAGATTTTAATCAAAGCCCTTGAACCTGTACCAAAATTCCGTGAT
TTAAACCGGCCAACTTACATAACACTTGTTGCTGGATTCTTATGGATGTCAATGTGGATT
TTAGCTGTGATTGGAGCTATAAATTTTTACTTTCCACCATTGGTTATCATCTTATTGGTT
CTGAGCATGACTTGGATTACTGAGGTAATGAGGAATGTGGTGAATTTGACAGTGAGTAGA
GTGATTGCTCTGTATTATCTAAGAGGGATGCAATCTAGTACACAGTTTTGTTTTCAGAGG
GCATTGTCTGTGAATCTTGGAAGTGCAAGCTTTGGTTCTTTATTTGTACCTACAATTGAA
GTGCTGAGGATTGTGGCTCGTGGGTTGAATTTGCTAGAGGGTGAAGATGAGTTCATGTTT
TGTTGTGCTCATTGTGGATTGAAAATCATGGATTCCATCTTTAAGCGCGGCAATGGTTGG
GCCTATGTTCAGATTGCTACATATGGGAAAAGTTTTGTGAAGGCATCACAAGACGCATGG
GAGTTGTTTGAAAAGAGGGAAATGGAGACAATAGTAGATTCGGACATGACCAGTGCCATT
TGCTTCCTAACCGGAGTTTGCAGCGGTTCCATTTGTGTCATTGTCGTTGCCGCTTGGACT
GCCACCGTCTACCCTAATTTCATCGCCACCTTGTCCCTCCTCTCTGCCTACATCGGTTAC
CTTCTGACGAGGATTGCCATGGCTTTGCCTCACGCTTGTGTAAGTAGTTACTACGTTTGT
TATGCTGAGAATCCGGATAACAGATGTTTTGACAAGTCGATAATTCAAGATCGACTAAAC
TTAATGAAGTCTGATCGTGACGTGATTGTGCCAACGCCTAGATCAGTTCCTGGTCGATTT
GCACGGTAG

Peptide Sequence

PEP ID

XP_016499223.1
PEP Infomation

PREDICTED: CTL-like protein DDB_G0274487 [Nicotiana tabacum]
Sequence

MGAVEPVVEEENGEKETKIRDEEEERDVEKGEMGSQQRGFQTQPPPPPATGSDNFNMSRM
QRLSATNPLRLVMNAGTRVASPSPPYHQAPPPAAPHQHRSFPIPFQHRPSPAQAPPPLPS
QHRPSPAPSQTRSTPATTPHQPSVITLNSRSYTNKFSLFIFLLHMVAAIGLVGFLLFKGV
QGLLEAGEAQRKERRLLKYFLPQVEAAALLSITLAFIWQKAMRVWPTFMIHFILWGSFIL
TLSAGILLICFQKPATDGVGVVFIMFAIGNGLYSCWVTPRIKFCTKILIKALEPVPKFRD
LNRPTYITLVAGFLWMSMWILAVIGAINFYFPPLVIILLVLSMTWITEVMRNVVNLTVSR
VIALYYLRGMQSSTQFCFQRALSVNLGSASFGSLFVPTIEVLRIVARGLNLLEGEDEFMF
CCAHCGLKIMDSIFKRGNGWAYVQIATYGKSFVKASQDAWELFEKREMETIVDSDMTSAI
CFLTGVCSGSICVIVVAAWTATVYPNFIATLSLLSAYIGYLLTRIAMALPHACVSSYYVC
YAENPDNRCFDKSIIQDRLNLMKSDRDVIVPTPRSVPGRFAR

Transcript Sequence

Gene sequence data has not been registered.